Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.59□□□□□ -0.07
Ythdf1P59326 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ythdf1P59326 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.59□□□□□ -0.07
Ythdf1P59326 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.59□□□□□ -0.07
Ythdf1P59326 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ythdf1P59326 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.58□□□□□ -0.07
Ythdf1P59326 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ythdf1P59326 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ythdf1P59326 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.58□□□□□ -0.08
Ythdf1P59326 Gm16061-201ENSMUST00000122167 857 ntBASIC14.58□□□□□ -0.08
Ythdf1P59326 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Gm10602-201ENSMUST00000098239 609 ntBASIC14.58□□□□□ -0.08
Ythdf1P59326 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Ythdf1P59326 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ythdf1P59326 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ythdf1P59326 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Ythdf1P59326 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.57□□□□□ -0.08
Ythdf1P59326 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.57□□□□□ -0.08
Ythdf1P59326 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ythdf1P59326 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Celf4-206ENSMUST00000224553 1729 ntBASIC14.57□□□□□ -0.08
Ythdf1P59326 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ythdf1P59326 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.56□□□□□ -0.08
Ythdf1P59326 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Ythdf1P59326 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.56□□□□□ -0.08
Ythdf1P59326 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.56□□□□□ -0.08
Ythdf1P59326 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Ythdf1P59326 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ythdf1P59326 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ythdf1P59326 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ythdf1P59326 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ythdf1P59326 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ythdf1P59326 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms