Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.09■□□□□ 0.65
Msh6P54276 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.09■□□□□ 0.65
Msh6P54276 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msh6P54276 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msh6P54276 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Msh6P54276 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.08■□□□□ 0.65
Msh6P54276 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Msh6P54276 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.08■□□□□ 0.65
Msh6P54276 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.08■□□□□ 0.65
Msh6P54276 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msh6P54276 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.08■□□□□ 0.65
Msh6P54276 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msh6P54276 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msh6P54276 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh6P54276 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh6P54276 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.08■□□□□ 0.64
Msh6P54276 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh6P54276 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.08■□□□□ 0.64
Msh6P54276 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.08■□□□□ 0.64
Msh6P54276 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh6P54276 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh6P54276 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.07■□□□□ 0.64
Msh6P54276 Gm7488-201ENSMUST00000117148 684 ntBASIC19.07■□□□□ 0.64
Msh6P54276 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.07■□□□□ 0.64
Msh6P54276 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.07■□□□□ 0.64
Msh6P54276 Gm15483-201ENSMUST00000120338 456 ntBASIC19.07■□□□□ 0.64
Msh6P54276 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh6P54276 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh6P54276 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh6P54276 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.07■□□□□ 0.64
Msh6P54276 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh6P54276 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh6P54276 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.07■□□□□ 0.64
Msh6P54276 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh6P54276 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh6P54276 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Msh6P54276 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Msh6P54276 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh6P54276 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh6P54276 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Gm14719-201ENSMUST00000121891 340 ntBASIC19.06■□□□□ 0.64
Msh6P54276 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.06■□□□□ 0.64
Msh6P54276 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Gm27680-201ENSMUST00000184192 160 ntBASIC19.06■□□□□ 0.64
Msh6P54276 Gm7730-201ENSMUST00000212486 454 ntBASIC19.06■□□□□ 0.64
Msh6P54276 Gm9063-201ENSMUST00000223299 582 ntBASIC19.06■□□□□ 0.64
Msh6P54276 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.06■□□□□ 0.64
Msh6P54276 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Msh6P54276 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Msh6P54276 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.06■□□□□ 0.64
Msh6P54276 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.06■□□□□ 0.64
Msh6P54276 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.06■□□□□ 0.64
Msh6P54276 Gm18049-201ENSMUST00000208909 581 ntBASIC19.06■□□□□ 0.64
Msh6P54276 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.06■□□□□ 0.64
Msh6P54276 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh6P54276 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Msh6P54276 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Gm8410-201ENSMUST00000117225 605 ntBASIC19.05■□□□□ 0.64
Msh6P54276 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.05■□□□□ 0.64
Msh6P54276 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.05■□□□□ 0.64
Msh6P54276 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.05■□□□□ 0.64
Msh6P54276 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Asic1-205ENSMUST00000228185 1818 ntBASIC19.05■□□□□ 0.64
Msh6P54276 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh6P54276 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Msh6P54276 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.04■□□□□ 0.64
Msh6P54276 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh6P54276 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msh6P54276 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msh6P54276 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msh6P54276 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms