Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm27301-201ENSMUST00000184012 127 ntBASIC15.99■□□□□ 0.15
Shmt1P50431 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.99■□□□□ 0.15
Shmt1P50431 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Shmt1P50431 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Shmt1P50431 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.99■□□□□ 0.15
Shmt1P50431 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.99■□□□□ 0.15
Shmt1P50431 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Shmt1P50431 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Shmt1P50431 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.99■□□□□ 0.15
Shmt1P50431 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Shmt1P50431 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Shmt1P50431 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.98■□□□□ 0.15
Shmt1P50431 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Shmt1P50431 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Shmt1P50431 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Shmt1P50431 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.98■□□□□ 0.15
Shmt1P50431 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shmt1P50431 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Shmt1P50431 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Shmt1P50431 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Shmt1P50431 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Gm15427-201ENSMUST00000117288 531 ntBASIC15.97■□□□□ 0.15
Shmt1P50431 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.97■□□□□ 0.15
Shmt1P50431 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.97■□□□□ 0.15
Shmt1P50431 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Shmt1P50431 Gm17271-201ENSMUST00000165535 355 ntBASIC15.97■□□□□ 0.15
Shmt1P50431 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Gm20553-201ENSMUST00000204205 844 ntBASIC15.97■□□□□ 0.15
Shmt1P50431 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Shmt1P50431 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.97■□□□□ 0.15
Shmt1P50431 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Shmt1P50431 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shmt1P50431 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.96■□□□□ 0.15
Shmt1P50431 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.96■□□□□ 0.15
Shmt1P50431 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.96■□□□□ 0.15
Shmt1P50431 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Shmt1P50431 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.96■□□□□ 0.15
Shmt1P50431 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Shmt1P50431 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shmt1P50431 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Shmt1P50431 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Shmt1P50431 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Shmt1P50431 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Shmt1P50431 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms