Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Brca1P48754 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.78■□□□□ 0.28
Brca1P48754 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Brca1P48754 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.78■□□□□ 0.28
Brca1P48754 Gm15678-201ENSMUST00000117573 960 ntBASIC16.78■□□□□ 0.28
Brca1P48754 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Brca1P48754 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.78■□□□□ 0.28
Brca1P48754 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.78■□□□□ 0.28
Brca1P48754 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.78■□□□□ 0.28
Brca1P48754 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.78■□□□□ 0.28
Brca1P48754 Gm46209-201ENSMUST00000217912 553 ntBASIC16.78■□□□□ 0.28
Brca1P48754 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Brca1P48754 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.78■□□□□ 0.28
Brca1P48754 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Brca1P48754 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Brca1P48754 Dancr-204ENSMUST00000132389 2347 ntBASIC16.78■□□□□ 0.28
Brca1P48754 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Brca1P48754 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brca1P48754 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Brca1P48754 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brca1P48754 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Brca1P48754 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.77■□□□□ 0.28
Brca1P48754 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.77■□□□□ 0.28
Brca1P48754 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brca1P48754 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.77■□□□□ 0.28
Brca1P48754 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brca1P48754 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Brca1P48754 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Brca1P48754 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Brca1P48754 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brca1P48754 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brca1P48754 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Brca1P48754 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Brca1P48754 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Brca1P48754 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Brca1P48754 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.77■□□□□ 0.27
Brca1P48754 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Brca1P48754 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.77■□□□□ 0.27
Brca1P48754 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.77■□□□□ 0.27
Brca1P48754 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Brca1P48754 Gm9229-201ENSMUST00000222777 126 ntBASIC16.77■□□□□ 0.27
Brca1P48754 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Brca1P48754 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Brca1P48754 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Brca1P48754 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Brca1P48754 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Brca1P48754 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.76■□□□□ 0.27
Brca1P48754 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Brca1P48754 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brca1P48754 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brca1P48754 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.76■□□□□ 0.27
Brca1P48754 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.76■□□□□ 0.27
Brca1P48754 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.76■□□□□ 0.27
Brca1P48754 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brca1P48754 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.76■□□□□ 0.27
Brca1P48754 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Brca1P48754 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Brca1P48754 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brca1P48754 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brca1P48754 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brca1P48754 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Brca1P48754 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.76■□□□□ 0.27
Brca1P48754 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brca1P48754 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Brca1P48754 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Brca1P48754 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Brca1P48754 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brca1P48754 Gm11425-201ENSMUST00000119608 498 ntBASIC16.75■□□□□ 0.27
Brca1P48754 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brca1P48754 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Brca1P48754 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.75■□□□□ 0.27
Brca1P48754 Gm28760-201ENSMUST00000185995 736 ntBASIC16.75■□□□□ 0.27
Brca1P48754 Gm45331-201ENSMUST00000209868 554 ntBASIC16.75■□□□□ 0.27
Brca1P48754 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Brca1P48754 Gm45453-201ENSMUST00000211758 853 ntBASIC16.75■□□□□ 0.27
Brca1P48754 Gm5035-201ENSMUST00000215581 927 ntBASIC16.75■□□□□ 0.27
Brca1P48754 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brca1P48754 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brca1P48754 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Brca1P48754 Gm9396-201ENSMUST00000076703 567 ntBASIC16.75■□□□□ 0.27
Brca1P48754 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Brca1P48754 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.75■□□□□ 0.27
Brca1P48754 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brca1P48754 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.75■□□□□ 0.27
Brca1P48754 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Brca1P48754 BC001981-202ENSMUST00000191393 1545 ntBASIC16.75■□□□□ 0.27
Brca1P48754 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Brca1P48754 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Brca1P48754 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Brca1P48754 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms