Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.43□□□□□ -0.42
Timp3P39876 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.43□□□□□ -0.42
Timp3P39876 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Timp3P39876 Gm18489-201ENSMUST00000172565 551 ntBASIC12.43□□□□□ -0.42
Timp3P39876 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.43□□□□□ -0.42
Timp3P39876 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.43□□□□□ -0.42
Timp3P39876 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.43□□□□□ -0.42
Timp3P39876 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.43□□□□□ -0.42
Timp3P39876 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Timp3P39876 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.43□□□□□ -0.42
Timp3P39876 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Timp3P39876 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Timp3P39876 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Timp3P39876 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.42□□□□□ -0.42
Timp3P39876 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Timp3P39876 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.42□□□□□ -0.42
Timp3P39876 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Timp3P39876 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.42□□□□□ -0.42
Timp3P39876 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Timp3P39876 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Timp3P39876 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Timp3P39876 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Timp3P39876 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.41□□□□□ -0.42
Timp3P39876 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.41□□□□□ -0.42
Timp3P39876 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Timp3P39876 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.41□□□□□ -0.42
Timp3P39876 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Timp3P39876 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.41□□□□□ -0.42
Timp3P39876 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Timp3P39876 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Gm24513-201ENSMUST00000174964 138 ntBASIC12.41□□□□□ -0.42
Timp3P39876 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Timp3P39876 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Gm27702-201ENSMUST00000184512 56 ntBASIC12.41□□□□□ -0.42
Timp3P39876 Gm27397-201ENSMUST00000184997 107 ntBASIC12.41□□□□□ -0.42
Timp3P39876 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.41□□□□□ -0.42
Timp3P39876 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.41□□□□□ -0.42
Timp3P39876 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.41□□□□□ -0.42
Timp3P39876 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.41□□□□□ -0.42
Timp3P39876 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.41□□□□□ -0.42
Timp3P39876 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Timp3P39876 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms