Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.19□□□□□ -0.14
RetP35546 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.19□□□□□ -0.14
RetP35546 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.19□□□□□ -0.14
RetP35546 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.19□□□□□ -0.14
RetP35546 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.19□□□□□ -0.14
RetP35546 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.19□□□□□ -0.14
RetP35546 Gm8825-201ENSMUST00000182565 998 ntBASIC14.19□□□□□ -0.14
RetP35546 Gm4518-201ENSMUST00000182638 718 ntBASIC14.19□□□□□ -0.14
RetP35546 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.19□□□□□ -0.14
RetP35546 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.19□□□□□ -0.14
RetP35546 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.19□□□□□ -0.14
RetP35546 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.19□□□□□ -0.14
RetP35546 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
RetP35546 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.19□□□□□ -0.14
RetP35546 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.19□□□□□ -0.14
RetP35546 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.19□□□□□ -0.14
RetP35546 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RetP35546 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RetP35546 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
RetP35546 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.18□□□□□ -0.14
RetP35546 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
RetP35546 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.18□□□□□ -0.14
RetP35546 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.18□□□□□ -0.14
RetP35546 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.18□□□□□ -0.14
RetP35546 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.18□□□□□ -0.14
RetP35546 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.18□□□□□ -0.14
RetP35546 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RetP35546 Chchd1-203ENSMUST00000224633 557 ntBASIC14.18□□□□□ -0.14
RetP35546 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
RetP35546 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.18□□□□□ -0.14
RetP35546 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RetP35546 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RetP35546 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RetP35546 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.17□□□□□ -0.14
RetP35546 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RetP35546 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
RetP35546 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.17□□□□□ -0.14
RetP35546 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RetP35546 Gm11764-201ENSMUST00000120221 623 ntBASIC14.17□□□□□ -0.14
RetP35546 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.17□□□□□ -0.14
RetP35546 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.17□□□□□ -0.14
RetP35546 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.17□□□□□ -0.14
RetP35546 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.17□□□□□ -0.14
RetP35546 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RetP35546 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms