Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.07□□□□□ -0.32
Slc6a1P31648 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.07□□□□□ -0.32
Slc6a1P31648 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Slc6a1P31648 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Slc6a1P31648 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.07□□□□□ -0.32
Slc6a1P31648 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Slc6a1P31648 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.07□□□□□ -0.32
Slc6a1P31648 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Slc6a1P31648 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Slc6a1P31648 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Slc6a1P31648 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Slc6a1P31648 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.06□□□□□ -0.32
Slc6a1P31648 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Slc6a1P31648 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Slc6a1P31648 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Slc6a1P31648 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Slc6a1P31648 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.06□□□□□ -0.32
Slc6a1P31648 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Slc6a1P31648 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Slc6a1P31648 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.06□□□□□ -0.32
Slc6a1P31648 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Slc6a1P31648 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Slc6a1P31648 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.05□□□□□ -0.32
Slc6a1P31648 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Slc6a1P31648 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms