Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf1aP25118 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Tnfrsf1aP25118 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Tnfrsf1aP25118 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf1aP25118 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfrsf1aP25118 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.71□□□□□ -0.38
Tnfrsf1aP25118 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfrsf1aP25118 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Gm15358-201ENSMUST00000119249 520 ntBASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfrsf1aP25118 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfrsf1aP25118 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms