Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.91■□□□□ 0.46
Col3a1P08121 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col3a1P08121 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Col3a1P08121 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col3a1P08121 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col3a1P08121 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col3a1P08121 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col3a1P08121 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col3a1P08121 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col3a1P08121 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.9■□□□□ 0.46
Col3a1P08121 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
Col3a1P08121 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col3a1P08121 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col3a1P08121 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.9■□□□□ 0.46
Col3a1P08121 Gm14767-201ENSMUST00000121559 586 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col3a1P08121 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm29310-201ENSMUST00000185468 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21825-201ENSMUST00000185728 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm29109-201ENSMUST00000185895 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21896-201ENSMUST00000186520 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21873-201ENSMUST00000186728 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21794-201ENSMUST00000187056 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21880-201ENSMUST00000187275 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21826-201ENSMUST00000187451 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21198-201ENSMUST00000188393 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21749-201ENSMUST00000189343 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21901-201ENSMUST00000189568 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm29424-201ENSMUST00000189716 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm28599-201ENSMUST00000189838 694 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21867-201ENSMUST00000189917 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm29269-201ENSMUST00000190087 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21722-201ENSMUST00000190153 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm28423-201ENSMUST00000190701 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21899-201ENSMUST00000190745 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21910-201ENSMUST00000191163 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21849-201ENSMUST00000191571 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm28678-201ENSMUST00000191593 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm20910-201ENSMUST00000193268 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm21871-201ENSMUST00000194621 696 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Olfr286-202ENSMUST00000205305 969 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm45098-201ENSMUST00000207179 657 ntBASIC17.9■□□□□ 0.46
Col3a1P08121 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.9■□□□□ 0.46
Col3a1P08121 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col3a1P08121 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col3a1P08121 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col3a1P08121 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Col3a1P08121 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Col3a1P08121 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col3a1P08121 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.89■□□□□ 0.46
Col3a1P08121 Gm5566-201ENSMUST00000116118 459 ntBASIC17.89■□□□□ 0.45
Col3a1P08121 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.89■□□□□ 0.45
Col3a1P08121 Mir6977-201ENSMUST00000184960 64 ntBASIC17.89■□□□□ 0.45
Col3a1P08121 Gm43438-201ENSMUST00000198133 379 ntBASIC17.89■□□□□ 0.45
Col3a1P08121 Gm7775-201ENSMUST00000218871 853 ntBASIC17.89■□□□□ 0.45
Col3a1P08121 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Col3a1P08121 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
Col3a1P08121 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Col3a1P08121 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.89■□□□□ 0.45
Col3a1P08121 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.89■□□□□ 0.45
Col3a1P08121 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col3a1P08121 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col3a1P08121 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Col3a1P08121 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.88■□□□□ 0.45
Col3a1P08121 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Gm9063-201ENSMUST00000223299 582 ntBASIC17.88■□□□□ 0.45
Col3a1P08121 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Col3a1P08121 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col3a1P08121 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms