Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.02□□□□□ -0.33
H3f3cP02301 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.02□□□□□ -0.33
H3f3cP02301 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
H3f3cP02301 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3f3cP02301 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H3f3cP02301 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
H3f3cP02301 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.01□□□□□ -0.33
H3f3cP02301 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
H3f3cP02301 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
H3f3cP02301 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
H3f3cP02301 Gm12350-201ENSMUST00000121208 462 ntBASIC13.01□□□□□ -0.33
H3f3cP02301 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
H3f3cP02301 Mir5126-201ENSMUST00000175513 77 ntBASIC13.01□□□□□ -0.33
H3f3cP02301 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
H3f3cP02301 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
H3f3cP02301 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.01□□□□□ -0.33
H3f3cP02301 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
H3f3cP02301 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
H3f3cP02301 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3f3cP02301 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13□□□□□ -0.33
H3f3cP02301 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13□□□□□ -0.33
H3f3cP02301 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13□□□□□ -0.33
H3f3cP02301 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
H3f3cP02301 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13□□□□□ -0.33
H3f3cP02301 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13□□□□□ -0.33
H3f3cP02301 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
H3f3cP02301 Gm18733-201ENSMUST00000173950 856 ntBASIC13□□□□□ -0.33
H3f3cP02301 Mir5131-201ENSMUST00000175426 93 ntBASIC13□□□□□ -0.33
H3f3cP02301 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Gm2651-201ENSMUST00000203560 838 ntBASIC13□□□□□ -0.33
H3f3cP02301 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
H3f3cP02301 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
H3f3cP02301 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13□□□□□ -0.33
H3f3cP02301 Gm10710-201ENSMUST00000047876 3971 ntBASIC13□□□□□ -0.33
H3f3cP02301 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3f3cP02301 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.99□□□□□ -0.33
H3f3cP02301 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
H3f3cP02301 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.99□□□□□ -0.33
H3f3cP02301 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.99□□□□□ -0.33
H3f3cP02301 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.99□□□□□ -0.33
H3f3cP02301 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 Gm13036-201ENSMUST00000117799 748 ntBASIC12.99□□□□□ -0.33
H3f3cP02301 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.99□□□□□ -0.33
H3f3cP02301 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.99□□□□□ -0.33
H3f3cP02301 Gm8318-201ENSMUST00000182954 872 ntBASIC12.99□□□□□ -0.33
H3f3cP02301 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.99□□□□□ -0.33
H3f3cP02301 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.99□□□□□ -0.33
H3f3cP02301 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.99□□□□□ -0.33
H3f3cP02301 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.99□□□□□ -0.33
H3f3cP02301 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3f3cP02301 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms