Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.79□□□□□ -0.36
Ifna1P01572 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.79□□□□□ -0.36
Ifna1P01572 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.79□□□□□ -0.36
Ifna1P01572 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.79□□□□□ -0.36
Ifna1P01572 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ifna1P01572 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ifna1P01572 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ifna1P01572 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.78□□□□□ -0.36
Ifna1P01572 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Gm10013-201ENSMUST00000106074 672 ntBASIC12.78□□□□□ -0.36
Ifna1P01572 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ifna1P01572 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.78□□□□□ -0.36
Ifna1P01572 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.78□□□□□ -0.36
Ifna1P01572 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.78□□□□□ -0.36
Ifna1P01572 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ifna1P01572 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ifna1P01572 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ifna1P01572 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ifna1P01572 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ifna1P01572 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.77□□□□□ -0.36
Ifna1P01572 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ifna1P01572 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ifna1P01572 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ifna1P01572 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ifna1P01572 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ifna1P01572 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ifna1P01572 Gm6433-201ENSMUST00000118634 875 ntBASIC12.77□□□□□ -0.37
Ifna1P01572 Gm15565-201ENSMUST00000118890 427 ntBASIC12.77□□□□□ -0.37
Ifna1P01572 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ifna1P01572 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.77□□□□□ -0.37
Ifna1P01572 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.77□□□□□ -0.37
Ifna1P01572 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ifna1P01572 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ifna1P01572 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.77□□□□□ -0.37
Ifna1P01572 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.76□□□□□ -0.37
Ifna1P01572 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ifna1P01572 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ifna1P01572 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ifna1P01572 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms