Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Gm12644-201ENSMUST00000119935 606 ntBASIC13.58□□□□□ -0.24
Hdac3O88895 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.58□□□□□ -0.24
Hdac3O88895 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Hdac3O88895 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.58□□□□□ -0.24
Hdac3O88895 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.58□□□□□ -0.24
Hdac3O88895 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.58□□□□□ -0.24
Hdac3O88895 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Birc2-201ENSMUST00000054878 378 ntBASIC13.58□□□□□ -0.24
Hdac3O88895 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.58□□□□□ -0.24
Hdac3O88895 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hdac3O88895 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.58□□□□□ -0.24
Hdac3O88895 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.58□□□□□ -0.24
Hdac3O88895 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hdac3O88895 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.57□□□□□ -0.24
Hdac3O88895 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.57□□□□□ -0.24
Hdac3O88895 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.57□□□□□ -0.24
Hdac3O88895 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.57□□□□□ -0.24
Hdac3O88895 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.57□□□□□ -0.24
Hdac3O88895 Gm4459-201ENSMUST00000118750 468 ntBASIC13.57□□□□□ -0.24
Hdac3O88895 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.57□□□□□ -0.24
Hdac3O88895 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.57□□□□□ -0.24
Hdac3O88895 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.57□□□□□ -0.24
Hdac3O88895 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.57□□□□□ -0.24
Hdac3O88895 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Hdac3O88895 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Hdac3O88895 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hdac3O88895 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Hdac3O88895 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Hdac3O88895 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.56□□□□□ -0.24
Hdac3O88895 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.56□□□□□ -0.24
Hdac3O88895 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.56□□□□□ -0.24
Hdac3O88895 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hdac3O88895 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Hdac3O88895 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.56□□□□□ -0.24
Hdac3O88895 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.56□□□□□ -0.24
Hdac3O88895 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.56□□□□□ -0.24
Hdac3O88895 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Hdac3O88895 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.56□□□□□ -0.24
Hdac3O88895 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Hdac3O88895 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms