Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cops6O88545 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.43■□□□□ 0.54
Cops6O88545 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cops6O88545 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.43■□□□□ 0.54
Cops6O88545 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.43■□□□□ 0.54
Cops6O88545 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cops6O88545 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.42■□□□□ 0.54
Cops6O88545 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.42■□□□□ 0.54
Cops6O88545 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.42■□□□□ 0.54
Cops6O88545 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cops6O88545 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cops6O88545 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.42■□□□□ 0.54
Cops6O88545 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Gm13223-201ENSMUST00000118609 747 ntBASIC18.42■□□□□ 0.54
Cops6O88545 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.42■□□□□ 0.54
Cops6O88545 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.42■□□□□ 0.54
Cops6O88545 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.42■□□□□ 0.54
Cops6O88545 Gm29541-201ENSMUST00000191351 678 ntBASIC18.42■□□□□ 0.54
Cops6O88545 Gm38294-201ENSMUST00000192831 381 ntBASIC18.42■□□□□ 0.54
Cops6O88545 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cops6O88545 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cops6O88545 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.41■□□□□ 0.54
Cops6O88545 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.41■□□□□ 0.54
Cops6O88545 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.41■□□□□ 0.54
Cops6O88545 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.41■□□□□ 0.54
Cops6O88545 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.41■□□□□ 0.54
Cops6O88545 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cops6O88545 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.4■□□□□ 0.54
Cops6O88545 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.4■□□□□ 0.54
Cops6O88545 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.4■□□□□ 0.54
Cops6O88545 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.4■□□□□ 0.54
Cops6O88545 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.4■□□□□ 0.54
Cops6O88545 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.4■□□□□ 0.54
Cops6O88545 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.4■□□□□ 0.54
Cops6O88545 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.4■□□□□ 0.54
Cops6O88545 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.4■□□□□ 0.54
Cops6O88545 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.4■□□□□ 0.54
Cops6O88545 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cops6O88545 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.39■□□□□ 0.54
Cops6O88545 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cops6O88545 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cops6O88545 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cops6O88545 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cops6O88545 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cops6O88545 Gm18049-201ENSMUST00000208909 581 ntBASIC18.39■□□□□ 0.53
Cops6O88545 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms