Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Gm7787-201ENSMUST00000216858 688 ntBASIC15.24■□□□□ 0.03
Dnmt3aO88508 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.24■□□□□ 0.03
Dnmt3aO88508 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.23■□□□□ 0.03
Dnmt3aO88508 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Gm8318-201ENSMUST00000182954 872 ntBASIC15.23■□□□□ 0.03
Dnmt3aO88508 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Dnmt3aO88508 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.22■□□□□ 0.03
Dnmt3aO88508 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.22■□□□□ 0.03
Dnmt3aO88508 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.22■□□□□ 0.03
Dnmt3aO88508 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dnmt3aO88508 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Gm1401-201ENSMUST00000122048 772 ntBASIC15.21■□□□□ 0.03
Dnmt3aO88508 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.21■□□□□ 0.03
Dnmt3aO88508 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dnmt3aO88508 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms