Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.36□□□□□ -0.11
Tgfbr3O88393 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.36□□□□□ -0.11
Tgfbr3O88393 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Gm13015-201ENSMUST00000118674 204 ntBASIC14.35□□□□□ -0.11
Tgfbr3O88393 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Gm29541-201ENSMUST00000191351 678 ntBASIC14.35□□□□□ -0.11
Tgfbr3O88393 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.35□□□□□ -0.11
Tgfbr3O88393 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.35□□□□□ -0.11
Tgfbr3O88393 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tgfbr3O88393 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.34□□□□□ -0.11
Tgfbr3O88393 Gm18049-201ENSMUST00000208909 581 ntBASIC14.34□□□□□ -0.11
Tgfbr3O88393 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Gm2423-201ENSMUST00000074863 733 ntBASIC14.34□□□□□ -0.11
Tgfbr3O88393 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.34□□□□□ -0.11
Tgfbr3O88393 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tgfbr3O88393 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tgfbr3O88393 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tgfbr3O88393 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tgfbr3O88393 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.33□□□□□ -0.11
Tgfbr3O88393 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.33□□□□□ -0.11
Tgfbr3O88393 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tgfbr3O88393 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tgfbr3O88393 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tgfbr3O88393 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tgfbr3O88393 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.33□□□□□ -0.12
Tgfbr3O88393 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tgfbr3O88393 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.33□□□□□ -0.12
Tgfbr3O88393 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tgfbr3O88393 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tgfbr3O88393 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.33□□□□□ -0.12
Tgfbr3O88393 Gm27920-201ENSMUST00000183953 96 ntBASIC14.33□□□□□ -0.12
Tgfbr3O88393 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tgfbr3O88393 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tgfbr3O88393 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tgfbr3O88393 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms