Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SncaO55042 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.56□□□□□ -0.4
SncaO55042 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SncaO55042 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.56□□□□□ -0.4
SncaO55042 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.56□□□□□ -0.4
SncaO55042 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.56□□□□□ -0.4
SncaO55042 Mir3081-201ENSMUST00000175305 84 ntBASIC12.56□□□□□ -0.4
SncaO55042 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Gm19164-201ENSMUST00000210667 640 ntBASIC12.56□□□□□ -0.4
SncaO55042 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
SncaO55042 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
SncaO55042 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.56□□□□□ -0.4
SncaO55042 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SncaO55042 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SncaO55042 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.55□□□□□ -0.4
SncaO55042 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Gm14722-201ENSMUST00000118943 689 ntBASIC12.55□□□□□ -0.4
SncaO55042 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SncaO55042 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.55□□□□□ -0.4
SncaO55042 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
SncaO55042 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SncaO55042 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.55□□□□□ -0.4
SncaO55042 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SncaO55042 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SncaO55042 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.54□□□□□ -0.4
SncaO55042 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.54□□□□□ -0.4
SncaO55042 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SncaO55042 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SncaO55042 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SncaO55042 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.54□□□□□ -0.4
SncaO55042 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.54□□□□□ -0.4
SncaO55042 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SncaO55042 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.54□□□□□ -0.4
SncaO55042 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms