Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.7■□□□□ 0.1
Cldn5O54942 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cldn5O54942 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.69■□□□□ 0.1
Cldn5O54942 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.69■□□□□ 0.1
Cldn5O54942 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Gm13365-201ENSMUST00000121188 973 ntBASIC15.69■□□□□ 0.1
Cldn5O54942 Gm11745-201ENSMUST00000121669 448 ntBASIC15.69■□□□□ 0.1
Cldn5O54942 Gm27494-201ENSMUST00000184735 189 ntBASIC15.69■□□□□ 0.1
Cldn5O54942 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.69■□□□□ 0.1
Cldn5O54942 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.69■□□□□ 0.1
Cldn5O54942 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cldn5O54942 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.69■□□□□ 0.1
Cldn5O54942 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.69■□□□□ 0.1
Cldn5O54942 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn5O54942 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cldn5O54942 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.68■□□□□ 0.1
Cldn5O54942 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cldn5O54942 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.68■□□□□ 0.1
Cldn5O54942 Gm45612-201ENSMUST00000211320 160 ntBASIC15.68■□□□□ 0.1
Cldn5O54942 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.68■□□□□ 0.1
Cldn5O54942 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cldn5O54942 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Cldn5O54942 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn5O54942 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.68■□□□□ 0.1
Cldn5O54942 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cldn5O54942 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.67■□□□□ 0.1
Cldn5O54942 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.67■□□□□ 0.1
Cldn5O54942 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.67■□□□□ 0.1
Cldn5O54942 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cldn5O54942 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn5O54942 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cldn5O54942 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.67■□□□□ 0.1
Cldn5O54942 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Cldn5O54942 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cldn5O54942 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cldn5O54942 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.66■□□□□ 0.1
Cldn5O54942 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Cldn5O54942 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn5O54942 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms