Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.31■□□□□ 0.04
ChkaO54804 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.31■□□□□ 0.04
ChkaO54804 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ChkaO54804 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ChkaO54804 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ChkaO54804 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ChkaO54804 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.3■□□□□ 0.04
ChkaO54804 Gm44357-201ENSMUST00000195897 142 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm19658-201ENSMUST00000196231 138 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm44367-201ENSMUST00000196836 138 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm44350-201ENSMUST00000197197 138 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm44390-201ENSMUST00000197533 144 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm44313-201ENSMUST00000198018 138 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm44486-201ENSMUST00000198508 138 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm44314-201ENSMUST00000199263 138 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm44394-201ENSMUST00000199558 138 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm44484-201ENSMUST00000199873 138 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm44466-201ENSMUST00000200264 138 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm44359-201ENSMUST00000200671 138 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.3■□□□□ 0.04
ChkaO54804 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.3■□□□□ 0.04
ChkaO54804 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.3■□□□□ 0.04
ChkaO54804 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.3■□□□□ 0.04
ChkaO54804 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ChkaO54804 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ChkaO54804 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ChkaO54804 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ChkaO54804 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.29■□□□□ 0.04
ChkaO54804 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.29■□□□□ 0.04
ChkaO54804 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
ChkaO54804 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.29■□□□□ 0.04
ChkaO54804 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.29■□□□□ 0.04
ChkaO54804 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Gm10499-201ENSMUST00000174094 934 ntBASIC15.29■□□□□ 0.04
ChkaO54804 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.29■□□□□ 0.04
ChkaO54804 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.29■□□□□ 0.04
ChkaO54804 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.29■□□□□ 0.04
ChkaO54804 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ChkaO54804 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ChkaO54804 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ChkaO54804 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.28■□□□□ 0.04
ChkaO54804 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ChkaO54804 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ChkaO54804 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ChkaO54804 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ChkaO54804 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ChkaO54804 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ChkaO54804 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ChkaO54804 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ChkaO54804 Gm4535-201ENSMUST00000182274 558 ntBASIC15.28■□□□□ 0.04
ChkaO54804 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.28■□□□□ 0.04
ChkaO54804 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.28■□□□□ 0.04
ChkaO54804 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ChkaO54804 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms