Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Npc1O35604 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Npc1O35604 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Npc1O35604 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Npc1O35604 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Npc1O35604 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Npc1O35604 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Npc1O35604 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.79□□□□□ -0.04
Npc1O35604 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Npc1O35604 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Gm37935-201ENSMUST00000192012 982 ntBASIC14.79□□□□□ -0.04
Npc1O35604 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Gm2213-201ENSMUST00000197485 688 ntBASIC14.79□□□□□ -0.04
Npc1O35604 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Npc1O35604 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.79□□□□□ -0.04
Npc1O35604 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Npc1O35604 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Npc1O35604 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.78□□□□□ -0.04
Npc1O35604 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.78□□□□□ -0.04
Npc1O35604 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Gm8318-201ENSMUST00000182954 872 ntBASIC14.78□□□□□ -0.04
Npc1O35604 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.78□□□□□ -0.04
Npc1O35604 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.78□□□□□ -0.04
Npc1O35604 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Npc1O35604 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Npc1O35604 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Npc1O35604 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Npc1O35604 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Npc1O35604 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Npc1O35604 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Npc1O35604 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
Npc1O35604 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Npc1O35604 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Npc1O35604 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Npc1O35604 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Npc1O35604 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Npc1O35604 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 Gm27300-201ENSMUST00000184085 97 ntBASIC14.77□□□□□ -0.05
Npc1O35604 Gm27335-201ENSMUST00000184758 97 ntBASIC14.77□□□□□ -0.05
Npc1O35604 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Npc1O35604 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Npc1O35604 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Npc1O35604 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Npc1O35604 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Npc1O35604 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms