Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Clcn6O35454 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC16.47■□□□□ 0.23
Clcn6O35454 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC16.47■□□□□ 0.23
Clcn6O35454 AC154627.1-201ENSMUST00000228799 1286 ntBASIC16.47■□□□□ 0.23
Clcn6O35454 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Clcn6O35454 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Clcn6O35454 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn6O35454 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Clcn6O35454 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Gm42942-201ENSMUST00000196086 1328 ntBASIC16.46■□□□□ 0.23
Clcn6O35454 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.46■□□□□ 0.23
Clcn6O35454 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Gm12584-201ENSMUST00000117109 1105 ntBASIC16.46■□□□□ 0.23
Clcn6O35454 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Clcn6O35454 Gm18421-201ENSMUST00000204122 625 ntBASIC16.46■□□□□ 0.23
Clcn6O35454 Gm21559-201ENSMUST00000220638 855 ntBASIC16.46■□□□□ 0.23
Clcn6O35454 AC116589.9-201ENSMUST00000221462 908 ntBASIC16.46■□□□□ 0.23
Clcn6O35454 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Gm8587-201ENSMUST00000076538 843 ntBASIC16.46■□□□□ 0.23
Clcn6O35454 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Clcn6O35454 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Clcn6O35454 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Clcn6O35454 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clcn6O35454 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn6O35454 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clcn6O35454 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Clcn6O35454 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.46■□□□□ 0.22
Clcn6O35454 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clcn6O35454 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.46■□□□□ 0.22
Clcn6O35454 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clcn6O35454 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clcn6O35454 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.45■□□□□ 0.22
Clcn6O35454 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Gm11411-201ENSMUST00000117951 719 ntBASIC16.45■□□□□ 0.22
Clcn6O35454 Gm14833-201ENSMUST00000118345 1027 ntBASIC16.45■□□□□ 0.22
Clcn6O35454 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Clcn6O35454 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Clcn6O35454 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.45■□□□□ 0.22
Clcn6O35454 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Clcn6O35454 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.45■□□□□ 0.22
Clcn6O35454 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC16.45■□□□□ 0.22
Clcn6O35454 AC159886.1-201ENSMUST00000217099 1091 ntBASIC16.45■□□□□ 0.22
Clcn6O35454 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Clcn6O35454 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Clcn6O35454 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clcn6O35454 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.45■□□□□ 0.22
Clcn6O35454 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clcn6O35454 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms