Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Ccdc180J3QNE4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Gm16011-201ENSMUST00000121567 2662 ntBASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Gm14042-201ENSMUST00000120139 833 ntBASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc180J3QNE4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc180J3QNE4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc180J3QNE4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc180J3QNE4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc180J3QNE4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc180J3QNE4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC27.28■■□□□ 1.96
Ccdc180J3QNE4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC27.28■■□□□ 1.96
Ccdc180J3QNE4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Gm6912-201ENSMUST00000117218 544 ntBASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Gm21854-201ENSMUST00000179901 471 ntBASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Gm9794-201ENSMUST00000202370 423 ntBASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Syt7-205ENSMUST00000224135 1557 ntBASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc180J3QNE4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Ccdc180J3QNE4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Ccdc180J3QNE4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 App-207ENSMUST00000227737 2827 ntBASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 Gm27631-201ENSMUST00000184163 466 ntBASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Ccdc180J3QNE4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ccdc180J3QNE4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ccdc180J3QNE4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ccdc180J3QNE4 Gm27528-202ENSMUST00000222916 2012 ntBASIC27.25■■□□□ 1.95
Ccdc180J3QNE4 AC238811.1-201ENSMUST00000225302 441 ntBASIC27.25■■□□□ 1.95
Ccdc180J3QNE4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ccdc180J3QNE4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Ccdc180J3QNE4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC27.25■■□□□ 1.95
Ccdc180J3QNE4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Gm8515-201ENSMUST00000194852 576 ntBASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Olfr286-202ENSMUST00000205305 969 ntBASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Prob1-201ENSMUST00000097619 3021 ntBASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Gm12859-201ENSMUST00000117834 427 ntBASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Gm37230-201ENSMUST00000194491 818 ntBASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ccdc180J3QNE4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms