Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Gm5354-201ENSMUST00000182417 973 ntBASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Gm29199-201ENSMUST00000187766 775 ntBASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc188F6WEU2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Gm13350-201ENSMUST00000120519 479 ntBASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Mir8109-201ENSMUST00000184375 117 ntBASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Gm17794-201ENSMUST00000220252 955 ntBASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc188F6WEU2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gm14722-201ENSMUST00000118943 689 ntBASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gm27486-201ENSMUST00000184923 80 ntBASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc188F6WEU2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Gm5187-201ENSMUST00000117317 991 ntBASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms