Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb9E9Q5G2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Gm11025-201ENSMUST00000140773 466 ntBASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb9E9Q5G2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb9E9Q5G2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb9E9Q5G2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb9E9Q5G2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb9E9Q5G2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb9E9Q5G2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb9E9Q5G2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Gm27494-201ENSMUST00000184735 189 ntBASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Chchd1-203ENSMUST00000224633 557 ntBASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb9E9Q5G2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms