Protein–RNA interactions for Protein: D3YXK1

Samd1, Atherin, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd1D3YXK1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Samd1D3YXK1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.27■□□□□ 0.36
Samd1D3YXK1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Gm18733-201ENSMUST00000173950 856 ntBASIC17.27■□□□□ 0.36
Samd1D3YXK1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Gm18421-201ENSMUST00000204122 625 ntBASIC17.27■□□□□ 0.36
Samd1D3YXK1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Samd1D3YXK1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Samd1D3YXK1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Samd1D3YXK1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Samd1D3YXK1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Samd1D3YXK1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Samd1D3YXK1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Samd1D3YXK1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Samd1D3YXK1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Samd1D3YXK1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Samd1D3YXK1 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.27■□□□□ 0.35
Samd1D3YXK1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Samd1D3YXK1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Samd1D3YXK1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.26■□□□□ 0.35
Samd1D3YXK1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.26■□□□□ 0.35
Samd1D3YXK1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samd1D3YXK1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.26■□□□□ 0.35
Samd1D3YXK1 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.26■□□□□ 0.35
Samd1D3YXK1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samd1D3YXK1 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.26■□□□□ 0.35
Samd1D3YXK1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Gm5867-201ENSMUST00000063197 592 ntBASIC17.26■□□□□ 0.35
Samd1D3YXK1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Samd1D3YXK1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Gm13312-201ENSMUST00000119631 718 ntBASIC17.25■□□□□ 0.35
Samd1D3YXK1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samd1D3YXK1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Gm18195-201ENSMUST00000207604 706 ntBASIC17.24■□□□□ 0.35
Samd1D3YXK1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.24■□□□□ 0.35
Samd1D3YXK1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samd1D3YXK1 Gm40377-201ENSMUST00000204604 2015 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms