Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Gm28659-201ENSMUST00000188013 759 ntBASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim30cD3YVI9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 BC037039-201ENSMUST00000192003 2205 ntBASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Gm25406-201ENSMUST00000157599 105 ntBASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Gm5864-201ENSMUST00000202263 970 ntBASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim30cD3YVI9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Gm13884-201ENSMUST00000118103 829 ntBASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Gm7506-201ENSMUST00000207758 815 ntBASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim30cD3YVI9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms