Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Gm9794-201ENSMUST00000202370 423 ntBASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Gm10275-201ENSMUST00000092620 635 ntBASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn7aB1AYL1 Gm45751-201ENSMUST00000210185 1573 ntBASIC19.27■□□□□ 0.68
Scn7aB1AYL1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Scn7aB1AYL1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn7aB1AYL1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn7aB1AYL1 Gm8515-201ENSMUST00000194852 576 ntBASIC19.27■□□□□ 0.68
Scn7aB1AYL1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn7aB1AYL1 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.27■□□□□ 0.68
Scn7aB1AYL1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.27■□□□□ 0.68
Scn7aB1AYL1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Scn7aB1AYL1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn7aB1AYL1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn7aB1AYL1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn7aB1AYL1 Gm12138-201ENSMUST00000122180 951 ntBASIC19.27■□□□□ 0.67
Scn7aB1AYL1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.27■□□□□ 0.67
Scn7aB1AYL1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn7aB1AYL1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.27■□□□□ 0.67
Scn7aB1AYL1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Scn7aB1AYL1 Gm7390-201ENSMUST00000212452 1216 ntBASIC19.27■□□□□ 0.67
Scn7aB1AYL1 Gm20445-201ENSMUST00000061905 565 ntBASIC19.27■□□□□ 0.67
Scn7aB1AYL1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn7aB1AYL1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Gm45195-201ENSMUST00000205597 1008 ntBASIC19.26■□□□□ 0.67
Scn7aB1AYL1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn7aB1AYL1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Prob1-201ENSMUST00000097619 3021 ntBASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Scn7aB1AYL1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scn7aB1AYL1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms