Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm5364-201ENSMUST00000216789 889 ntBASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm12008-201ENSMUST00000117791 755 ntBASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm17968-201ENSMUST00000194902 784 ntBASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 AW822252-206ENSMUST00000208904 237 ntBASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms