Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm14722-201ENSMUST00000118943 689 ntBASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav21-dv12A0A075B6C4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav21-dv12A0A075B6C4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm18669-201ENSMUST00000216049 778 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms