Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Gm27920-201ENSMUST00000183953 96 ntBASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav8n-2A0A075B633 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Gm13823-201ENSMUST00000119930 345 ntBASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Gm14767-201ENSMUST00000121559 586 ntBASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav8n-2A0A075B633 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.81□□□□□ -0.2
Trav8n-2A0A075B633 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Gm38294-201ENSMUST00000192831 381 ntBASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms