Protein–RNA interactions for Protein: Q9Z1N5

Ddx39b, Spliceosome RNA helicase Ddx39b, mousemouse

Known RBP Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39bQ9Z1N5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39bQ9Z1N5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.26■□□□□ 0.03
Ddx39bQ9Z1N5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39bQ9Z1N5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44357-201ENSMUST00000195897 142 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm19658-201ENSMUST00000196231 138 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44367-201ENSMUST00000196836 138 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44350-201ENSMUST00000197197 138 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44390-201ENSMUST00000197533 144 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44313-201ENSMUST00000198018 138 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44486-201ENSMUST00000198508 138 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44314-201ENSMUST00000199263 138 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44394-201ENSMUST00000199558 138 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44484-201ENSMUST00000199873 138 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44466-201ENSMUST00000200264 138 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44359-201ENSMUST00000200671 138 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39bQ9Z1N5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Gm14722-201ENSMUST00000118943 689 ntBASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Gm27646-201ENSMUST00000183989 110 ntBASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Gm34391-201ENSMUST00000203706 907 ntBASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx39bQ9Z1N5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Gm24589-201ENSMUST00000116692 94 ntBASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Gm15358-201ENSMUST00000119249 520 ntBASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Gm4535-201ENSMUST00000182274 558 ntBASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Gm10355-201ENSMUST00000097146 517 ntBASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx39bQ9Z1N5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms