Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx9Q9WUH2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx9Q9WUH2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx9Q9WUH2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx9Q9WUH2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx9Q9WUH2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Gm14701-201ENSMUST00000117156 348 ntBASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Gm5177-201ENSMUST00000183092 997 ntBASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Gm27301-201ENSMUST00000184012 127 ntBASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lhx9Q9WUH2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms