Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Gm4459-201ENSMUST00000118750 468 ntBASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl28Q9JIL2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl28Q9JIL2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Ccl28Q9JIL2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccl28Q9JIL2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl28Q9JIL2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl28Q9JIL2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccl28Q9JIL2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl28Q9JIL2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl28Q9JIL2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl28Q9JIL2 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.27□□□□□ -0.44
Ccl28Q9JIL2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Gm14722-201ENSMUST00000118943 689 ntBASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl28Q9JIL2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Gm7977-201ENSMUST00000193787 748 ntBASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl28Q9JIL2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms