Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Rprl2-201ENSMUST00000157150 290 ntBASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3bQ9ES34 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3bQ9ES34 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Gm18057-201ENSMUST00000208220 503 ntBASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3bQ9ES34 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3bQ9ES34 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.96■□□□□ 0.46
Ube3bQ9ES34 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.96■□□□□ 0.46
Ube3bQ9ES34 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Gm6973-201ENSMUST00000117080 721 ntBASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Gm18889-201ENSMUST00000174284 929 ntBASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Gm44335-201ENSMUST00000196879 141 ntBASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Gm44297-201ENSMUST00000198304 141 ntBASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Gm44346-201ENSMUST00000198851 141 ntBASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Gm8396-201ENSMUST00000057361 823 ntBASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3bQ9ES34 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms