Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.22■□□□□ 0.03
Vps35Q9EQH3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Gm15590-201ENSMUST00000078419 552 ntBASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps35Q9EQH3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
Vps35Q9EQH3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps35Q9EQH3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps35Q9EQH3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Gm44771-201ENSMUST00000206975 626 ntBASIC15.2■□□□□ 0.02
Vps35Q9EQH3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps35Q9EQH3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Gm9682-201ENSMUST00000197505 556 ntBASIC15.19■□□□□ 0.02
Vps35Q9EQH3 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms