Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf1Q9EPU0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Gm26083-201ENSMUST00000157904 193 ntBASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Mir433-201ENSMUST00000093564 124 ntBASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upf1Q9EPU0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Gm27341-201ENSMUST00000183570 106 ntBASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Gm27501-201ENSMUST00000183599 107 ntBASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Gm27516-201ENSMUST00000184237 98 ntBASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Gm43138-201ENSMUST00000199123 708 ntBASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Gm40466-201ENSMUST00000212174 422 ntBASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.04■□□□□ 0.32
Upf1Q9EPU0 CT573034.1-201ENSMUST00000222983 313 ntBASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.04■□□□□ 0.32
Upf1Q9EPU0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 AU022133-201ENSMUST00000200601 873 ntBASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Gm45930-201ENSMUST00000221330 292 ntBASIC17.03■□□□□ 0.32
Upf1Q9EPU0 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upf1Q9EPU0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Gm9823-201ENSMUST00000051212 327 ntBASIC17.02■□□□□ 0.32
Upf1Q9EPU0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Upf1Q9EPU0 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.02■□□□□ 0.31
Upf1Q9EPU0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Upf1Q9EPU0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Upf1Q9EPU0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Gm15393-201ENSMUST00000120499 219 ntBASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC17.01■□□□□ 0.31
Upf1Q9EPU0 Gm7593-201ENSMUST00000187246 644 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms