Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp2aQ9DB34 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Gm14722-201ENSMUST00000118943 689 ntBASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Gm18489-201ENSMUST00000172565 551 ntBASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Gm4899-201ENSMUST00000178708 719 ntBASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Gm8318-201ENSMUST00000182954 872 ntBASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp2aQ9DB34 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp2aQ9DB34 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp2aQ9DB34 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Chmp2aQ9DB34 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp2aQ9DB34 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp2aQ9DB34 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp2aQ9DB34 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Gm11764-201ENSMUST00000120221 623 ntBASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Gm1401-201ENSMUST00000122048 772 ntBASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Gm10499-201ENSMUST00000174094 934 ntBASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 AW822252-206ENSMUST00000208904 237 ntBASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Gm5364-201ENSMUST00000216789 889 ntBASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms