Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp5Q9D7S9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp5Q9D7S9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp5Q9D7S9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp5Q9D7S9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC19.01■□□□□ 0.63
Chmp5Q9D7S9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp5Q9D7S9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp5Q9D7S9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp5Q9D7S9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp5Q9D7S9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC19.01■□□□□ 0.63
Chmp5Q9D7S9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Gm18622-201ENSMUST00000219361 595 ntBASIC19■□□□□ 0.63
Chmp5Q9D7S9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp5Q9D7S9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp5Q9D7S9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp5Q9D7S9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp5Q9D7S9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms