Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Gm25287-201ENSMUST00000103846 110 ntBASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Gm22918-201ENSMUST00000103855 110 ntBASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Gm22175-201ENSMUST00000175007 78 ntBASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Gm7774-201ENSMUST00000200064 533 ntBASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stag1Q9D3E6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Gm24158-201ENSMUST00000175263 71 ntBASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Gm10253-201ENSMUST00000194270 940 ntBASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stag1Q9D3E6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Stag1Q9D3E6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Stag1Q9D3E6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Stag1Q9D3E6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Stag1Q9D3E6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18■□□□□ 0.47
Stag1Q9D3E6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Stag1Q9D3E6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Gm27430-201ENSMUST00000184585 107 ntBASIC18■□□□□ 0.47
Stag1Q9D3E6 Gm44333-201ENSMUST00000197168 107 ntBASIC18■□□□□ 0.47
Stag1Q9D3E6 Gm20949-201ENSMUST00000206478 952 ntBASIC18■□□□□ 0.47
Stag1Q9D3E6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18■□□□□ 0.47
Stag1Q9D3E6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Stag1Q9D3E6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stag1Q9D3E6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18■□□□□ 0.47
Stag1Q9D3E6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Stag1Q9D3E6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms