Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1aQ9CU62 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Smc1aQ9CU62 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1aQ9CU62 Gm9768-201ENSMUST00000206007 2861 ntBASIC17■□□□□ 0.31
Smc1aQ9CU62 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1aQ9CU62 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17■□□□□ 0.31
Smc1aQ9CU62 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smc1aQ9CU62 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smc1aQ9CU62 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1aQ9CU62 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1aQ9CU62 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1aQ9CU62 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc1aQ9CU62 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Gm8655-201ENSMUST00000221159 852 ntBASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc1aQ9CU62 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Gm9172-201ENSMUST00000212092 954 ntBASIC16.98■□□□□ 0.31
Smc1aQ9CU62 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.98■□□□□ 0.31
Smc1aQ9CU62 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.98■□□□□ 0.31
Smc1aQ9CU62 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1aQ9CU62 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Gm14140-201ENSMUST00000119999 995 ntBASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Gm11780-201ENSMUST00000136880 516 ntBASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Gm2756-201ENSMUST00000195851 400 ntBASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1aQ9CU62 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.96■□□□□ 0.31
Smc1aQ9CU62 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1aQ9CU62 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1aQ9CU62 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1aQ9CU62 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms