Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prpf8Q99PV0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Gm18889-201ENSMUST00000174284 929 ntBASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Gm20553-201ENSMUST00000204205 844 ntBASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Gm10154-201ENSMUST00000084445 354 ntBASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf8Q99PV0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Gm27622-201ENSMUST00000183779 60 ntBASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf8Q99PV0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms