Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf3Q99LI7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Ank2-226ENSMUST00000189368 339 ntBASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.68□□□□□ -0.06
Cstf3Q99LI7 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf3Q99LI7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Gm8318-201ENSMUST00000182954 872 ntBASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.67□□□□□ -0.06
Cstf3Q99LI7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.66□□□□□ -0.06
Cstf3Q99LI7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms