Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhac1Q91Y10 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhac1Q91Y10 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhac1Q91Y10 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhac1Q91Y10 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Gm27867-201ENSMUST00000184778 125 ntBASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac1Q91Y10 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhac1Q91Y10 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhac1Q91Y10 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhac1Q91Y10 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Gm12644-201ENSMUST00000119935 606 ntBASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac1Q91Y10 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhac1Q91Y10 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac1Q91Y10 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms