Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb22Q91XZ8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Gm27525-201ENSMUST00000184465 107 ntBASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Gm2272-201ENSMUST00000194903 582 ntBASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Gm43514-201ENSMUST00000198852 424 ntBASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb22Q91XZ8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb22Q91XZ8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb22Q91XZ8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb22Q91XZ8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb22Q91XZ8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb22Q91XZ8 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.65■□□□□ 0.42
Pcdhb22Q91XZ8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb22Q91XZ8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb22Q91XZ8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb22Q91XZ8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb22Q91XZ8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb22Q91XZ8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms