Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm27397-201ENSMUST00000184997 107 ntBASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.42■□□□□ 0.38
Ddx41Q91VN6 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx41Q91VN6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.41■□□□□ 0.38
Ddx41Q91VN6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.41■□□□□ 0.38
Ddx41Q91VN6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Gm14822-201ENSMUST00000122247 291 ntBASIC17.4■□□□□ 0.38
Ddx41Q91VN6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Gm18489-201ENSMUST00000172565 551 ntBASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Gm9682-201ENSMUST00000197505 556 ntBASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.4■□□□□ 0.38
Ddx41Q91VN6 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ddx41Q91VN6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx41Q91VN6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms