Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.73□□□□□ -0.37
H1fooQ8VIK3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H1fooQ8VIK3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Gm9103-201ENSMUST00000119371 405 ntBASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Gm4535-201ENSMUST00000182274 558 ntBASIC12.72□□□□□ -0.37
H1fooQ8VIK3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Gm10355-201ENSMUST00000097146 517 ntBASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H1fooQ8VIK3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.71□□□□□ -0.37
H1fooQ8VIK3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms