Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Gm15427-201ENSMUST00000117288 531 ntBASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Gm13616-201ENSMUST00000120600 222 ntBASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zcchc9Q8R1J3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zcchc9Q8R1J3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Gm27301-201ENSMUST00000184012 127 ntBASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zcchc9Q8R1J3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms