Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Clrn1Q8K445 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.34□□□□□ -0.11
Clrn1Q8K445 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.34□□□□□ -0.11
Clrn1Q8K445 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.34□□□□□ -0.11
Clrn1Q8K445 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.34□□□□□ -0.11
Clrn1Q8K445 Gm18489-201ENSMUST00000172565 551 ntBASIC14.34□□□□□ -0.11
Clrn1Q8K445 Mir5131-201ENSMUST00000175426 93 ntBASIC14.34□□□□□ -0.11
Clrn1Q8K445 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.34□□□□□ -0.11
Clrn1Q8K445 AV026068-213ENSMUST00000223675 1171 ntBASIC14.34□□□□□ -0.11
Clrn1Q8K445 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn1Q8K445 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn1Q8K445 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn1Q8K445 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn1Q8K445 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn1Q8K445 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn1Q8K445 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn1Q8K445 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.33□□□□□ -0.12
Clrn1Q8K445 BC037039-201ENSMUST00000192003 2205 ntBASIC14.33□□□□□ -0.12
Clrn1Q8K445 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn1Q8K445 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Clrn1Q8K445 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Gm9682-201ENSMUST00000197505 556 ntBASIC14.33□□□□□ -0.12
Clrn1Q8K445 Gm7787-201ENSMUST00000216858 688 ntBASIC14.33□□□□□ -0.12
Clrn1Q8K445 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn1Q8K445 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn1Q8K445 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clrn1Q8K445 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.32□□□□□ -0.12
Clrn1Q8K445 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Gm10499-201ENSMUST00000174094 934 ntBASIC14.32□□□□□ -0.12
Clrn1Q8K445 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.32□□□□□ -0.12
Clrn1Q8K445 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn1Q8K445 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.31□□□□□ -0.12
Clrn1Q8K445 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Gm11764-201ENSMUST00000120221 623 ntBASIC14.31□□□□□ -0.12
Clrn1Q8K445 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn1Q8K445 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms