Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Gm13418-201ENSMUST00000119097 944 ntBASIC15.32■□□□□ 0.04
Clip4Q8CI96 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.32■□□□□ 0.04
Clip4Q8CI96 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Gm44771-201ENSMUST00000206975 626 ntBASIC15.32■□□□□ 0.04
Clip4Q8CI96 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Clip4Q8CI96 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.31■□□□□ 0.04
Clip4Q8CI96 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.31■□□□□ 0.04
Clip4Q8CI96 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clip4Q8CI96 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Gm25990-201ENSMUST00000102440 86 ntBASIC15.3■□□□□ 0.04
Clip4Q8CI96 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.3■□□□□ 0.04
Clip4Q8CI96 Gm18733-201ENSMUST00000173950 856 ntBASIC15.3■□□□□ 0.04
Clip4Q8CI96 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Clip4Q8CI96 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Gm10060-201ENSMUST00000212002 111 ntBASIC15.3■□□□□ 0.04
Clip4Q8CI96 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.3■□□□□ 0.04
Clip4Q8CI96 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clip4Q8CI96 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clip4Q8CI96 Gm11780-201ENSMUST00000136880 516 ntBASIC15.29■□□□□ 0.04
Clip4Q8CI96 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms