Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.66■□□□□ 0.42
Alx1Q8C8B0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Alx1Q8C8B0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Gm2756-201ENSMUST00000195851 400 ntBASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Alx1Q8C8B0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Alx1Q8C8B0 Gm24513-201ENSMUST00000174964 138 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms