Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Gm18622-201ENSMUST00000219361 595 ntBASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Mir5131-201ENSMUST00000175426 93 ntBASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Gm10060-201ENSMUST00000212002 111 ntBASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4Q8BQZ5 Grk6-207ENSMUST00000225925 2769 ntBASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4Q8BQZ5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Gm18195-201ENSMUST00000207604 706 ntBASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms